EnhancerDB
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  3. rs548998380[chr6:13357929]
Enhancers that have rs548998380[chr6:13357929]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13348613 13358032 enh8959
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Breast Thymus Heart
Transcript factors that have rs548998380[chr6:13357929]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13357923 13357943 RREB1 JASPAR yes 100020316
chr6 13357925 13357945 RREB1 JASPAR yes 100020317
chr6 13357929 13357949 RREB1 JASPAR yes 100020318
Genes associated with rs548998380[chr6:13357929], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More