EnhancerDB
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  3. rs549000816[chr1:3451798]
Enhancers that have rs549000816[chr1:3451798]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3448190 3482098 enh11432
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs549000816[chr1:3451798]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3451779 3451798 PAX5 JASPAR yes 26292945
chr1 3451797 3451812 TFAP2C JASPAR yes 26292946
Genes associated with rs549000816[chr1:3451798], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More