EnhancerDB
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  3. rs549018880[chr1:25020034]
Enhancers that have rs549018880[chr1:25020034]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25002143 25025115 enh11624
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs549018880[chr1:25020034]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25017256 25025212 ZNF274 GTRD no Blood (GM12878) 107802463
chr1 25017364 25039918 ZNF274 GTRD no Blood (GM12878) 21325292
chr1 25020023 25020038 MEF2A JASPAR yes 27519103
chr1 25020024 25020039 MEF2C JASPAR yes 27519104
chr1 25020025 25020037 MEF2A JASPAR yes 27519105
chr1 25020025 25020037 MEF2B JASPAR yes 27519106
chr1 25020025 25020037 MEF2D JASPAR yes 27519107
Genes associated with rs549018880[chr1:25020034], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More