EnhancerDB
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  3. rs549056673[chr2:236411831]
Enhancers that have rs549056673[chr2:236411831]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 236405325 236429424 enh19364
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549056673[chr2:236411831]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 236411820 236411831 NFIL3 JASPAR yes 81975064
chr2 236411824 236411845 IRF1 JASPAR yes 81975065
chr2 236411825 236411838 POU2F2 JASPAR yes 81975066
chr2 236411826 236411841 IRF9 JASPAR yes 81975067
chr2 236411827 236411841 IRF7 JASPAR yes 81975068
chr2 236411827 236411841 IRF8 JASPAR yes 81975069
chr2 236411828 236411843 PRDM1 JASPAR yes 81975070
chr2 236411828 236411843 STAT2 JASPAR yes 81975071
Genes associated with rs549056673[chr2:236411831], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More