EnhancerDB
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  3. rs549061212[chr17:2005709]
Enhancers that have rs549061212[chr17:2005709]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2002699 2018915 enh32048
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs549061212[chr17:2005709]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2005706 2005716 SREBF1 JASPAR yes 52723583
chr17 2005706 2005716 SREBF2 JASPAR yes 52723584
chr17 2005706 2005719 EOMES JASPAR yes 52723585
chr17 2005707 2005715 MGA JASPAR yes 52723586
Genes associated with rs549061212[chr17:2005709], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More