EnhancerDB
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  3. rs549077717[chr1:24280860]
Enhancers that have rs549077717[chr1:24280860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24265865 24284077 enh132
Astrocyte Blood (Karpas-422) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs549077717[chr1:24280860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24280844 24280865 IRF1 JASPAR yes 27471869
chr1 24280847 24280862 FOXP1 JASPAR yes 27471870
chr1 24280848 24280863 STAT2 JASPAR yes 27471871
chr1 24280849 24280864 FOXP1 JASPAR yes 27471872
chr1 24280849 24280870 IRF1 JASPAR yes 27471873
chr1 24280850 24280871 IRF1 JASPAR yes 27471874
chr1 24280851 24280863 FOXC2 JASPAR yes 27471875
chr1 24280851 24280871 RREB1 JASPAR yes 27471876
chr1 24280852 24280863 FOXP2 JASPAR yes 27471877
chr1 24280856 24280876 RREB1 JASPAR yes 27471878
chr1 24280857 24280872 FOXP1 JASPAR yes 27471879
chr1 24280859 24280879 RREB1 JASPAR yes 27471880
chr1 24280860 24280871 FOXP2 JASPAR yes 27471881
Genes associated with rs549077717[chr1:24280860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More