EnhancerDB
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  3. rs549088446[chr2:216711048]
Enhancers that have rs549088446[chr2:216711048]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 216688425 216718115 enh6146
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Ovary Blood (OCI-LY7) Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr2 216710914 216711300 vista34656
VISTA
Transcript factors that have rs549088446[chr2:216711048]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 216711031 216711052 ZNF263 JASPAR yes 22204996
chr2 216711031 216711052 ZNF263 JASPAR yes 80813620
chr2 216711034 216711055 ZNF263 JASPAR yes 22204997
chr2 216711034 216711055 ZNF263 JASPAR yes 80813621
chr2 216711040 216711055 PRDM1 JASPAR yes 22204998
chr2 216711040 216711055 PRDM1 JASPAR yes 80813622
chr2 216711042 216711063 IRF1 JASPAR yes 22204999
chr2 216711042 216711063 IRF1 JASPAR yes 80813623
chr2 216711046 216711060 STAT1 JASPAR yes 22205000
chr2 216711046 216711060 STAT1 JASPAR yes 80813624
chr2 216711046 216711061 PRDM1 JASPAR yes 22205001
chr2 216711046 216711061 STAT2 JASPAR yes 22205002
chr2 216711046 216711061 PRDM1 JASPAR yes 80813625
chr2 216711046 216711061 STAT2 JASPAR yes 80813626
chr2 216711048 216711069 IRF1 JASPAR yes 22205003
chr2 216711048 216711069 IRF1 JASPAR yes 80813627
Genes associated with rs549088446[chr2:216711048], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More