EnhancerDB
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  3. rs549095959[chr1:169090188]
Enhancers that have rs549095959[chr1:169090188]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 169076205 169091718 enh12359
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs549095959[chr1:169090188]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 169090167 169090188 IRF1 JASPAR yes 32984946
chr1 169090172 169090193 IRF1 JASPAR yes 32984949
chr1 169090173 169090188 FOXP1 JASPAR yes 32984950
chr1 169090173 169090194 IRF1 JASPAR yes 32984951
chr1 169090174 169090189 STAT2 JASPAR yes 32984952
chr1 169090177 169090198 IRF1 JASPAR yes 32984953
chr1 169090178 169090193 FOXP1 JASPAR yes 32984954
chr1 169090178 169090199 IRF1 JASPAR yes 32984955
chr1 169090182 169090203 IRF1 JASPAR yes 32984956
chr1 169090183 169090198 FOXP1 JASPAR yes 32984957
chr1 169090183 169090204 IRF1 JASPAR yes 32984958
chr1 169090185 169090200 FOXP1 JASPAR yes 32984959
chr1 169090187 169090202 FOXP1 JASPAR yes 32984960
chr1 169090188 169090203 FOXP1 JASPAR yes 32984961
Genes associated with rs549095959[chr1:169090188], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More