EnhancerDB
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  3. rs549098735[chr17:39953026]
Enhancers that have rs549098735[chr17:39953026]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39947125 39957819 enh17155
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Stomach Placenta Colon (HCT116) Uterus Epithelial (MCF-7)
Transcript factors that have rs549098735[chr17:39953026]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39951896 39953988 TCF7L2 GTRD no Colon (HCT116) 21758369
chr17 39952025 39953870 TCF7L2 GTRD no Colon (HCT116) 21758370
chr17 39952037 39953948 TCF7L2 GTRD no Colon (HCT116) 21758371
chr17 39952102 39953795 TCF7L2 GTRD no Colon (HCT116) 21758373
chr17 39952239 39954156 TCF7L2 GTRD no Colon (HCT116) 21758374
chr17 39952255 39953814 TCF7L2 GTRD no Colon (HCT116) 21758376
chr17 39952346 39954000 TCF7L2 GTRD no Colon (HCT116) 21758378
chr17 39952454 39953659 ZNF143 GTRD no Epithelial (MCF-7) 21758379
chr17 39952466 39953663 TCF7L2 GTRD no Colon (HCT116) 21758380
chr17 39952468 39953700 ZNF143 GTRD no Epithelial (MCF-7) 21758381
chr17 39952494 39953846 TCF7L2 GTRD no Colon (HCT116) 21758382
chr17 39952507 39953522 TCF7L2 GTRD no Colon (HCT116) 21758383
chr17 39952531 39953788 ZNF143 GTRD no Epithelial (MCF-7) 21758384
chr17 39952546 39953352 ZNF143 GTRD no Epithelial (MCF-7) 21758385
chr17 39952555 39953808 TCF7L2 GTRD no Colon (HCT116) 21758386
chr17 39952556 39953027 ZNF143 GTRD no Epithelial (MCF-7) 21758387
chr17 39952560 39953763 ZNF143 GTRD no Epithelial (MCF-7) 21758388
chr17 39952636 39953239 TCF7L2 GTRD no Colon (HCT116) 21758390
chr17 39952741 39953245 ZNF143 GTRD no Epithelial (MCF-7) 21758391
chr17 39952935 39953699 ZNF143 GTRD no Epithelial (MCF-7) 21758392
chr17 39953013 39953034 IRF1 JASPAR yes 54277002
chr17 39953015 39953030 STAT2 JASPAR yes 54277005
chr17 39953016 39953030 STAT1 JASPAR yes 54277006
chr17 39953017 39953031 IRF7 JASPAR yes 54277007
chr17 39953017 39953032 IRF9 JASPAR yes 54277008
chr17 39953021 39953041 RREB1 JASPAR yes 54277009
chr17 39953022 39953042 RREB1 JASPAR yes 54277010
chr17 39953025 39953031 TCF4 TRANSFAC yes 54277011
chr17 39953025 39953037 FOXI1 JASPAR yes 54277012
chr17 39953025 39953040 FOXP1 JASPAR yes 54277013
chr17 39953025 39953045 RREB1 JASPAR yes 54277014
chr17 39953026 39953046 RREB1 JASPAR yes 54277015
Genes associated with rs549098735[chr17:39953026], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More