EnhancerDB
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Enhancers that have rs549118052[chr1:233658662]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 233652007 233661080 enh58228
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Colon (HCT116) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs549118052[chr1:233658662]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 233658651 233658663 POU2F1 JASPAR yes 36228440
chr1 233658651 233658664 POU3F3 JASPAR yes 36228441
chr1 233658651 233658665 POU1F1 JASPAR yes 36228442
chr1 233658652 233658663 FOXA1 JASPAR yes 36228443
chr1 233658652 233658664 POU3F1 JASPAR yes 36228444
chr1 233658652 233658664 POU3F2 JASPAR yes 36228445
chr1 233658652 233658665 POU2F2 JASPAR yes 36228446
chr1 233658652 233658667 FOXA1 JASPAR yes 36228447
chr1 233658653 233658662 POU3F4 JASPAR yes 36228449
chr1 233658653 233658662 POU5F1B JASPAR yes 36228450
chr1 233658653 233658664 FOXB1 JASPAR yes 36228451
chr1 233658653 233658664 FOXC1 JASPAR yes 36228452
chr1 233658653 233658665 FOXC2 JASPAR yes 36228453
chr1 233658661 233658665 TEAD2 TRANSFAC yes 36228454
Genes associated with rs549118052[chr1:233658662], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More