EnhancerDB
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  3. rs549135519[chr1:10969388]
Enhancers that have rs549135519[chr1:10969388]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10948885 10972333 enh11498
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs549135519[chr1:10969388]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10969380 10969392 GLI2 JASPAR yes 26760055
Genes associated with rs549135519[chr1:10969388], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More