EnhancerDB
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  3. rs549186529[chr6:41697469]
Enhancers that have rs549186529[chr6:41697469]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549186529[chr6:41697469]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41697456 41697477 ZNF263 JASPAR yes 101670199
chr6 41697459 41697469 SP1 JASPAR yes 101670200
chr6 41697459 41697480 ZNF263 JASPAR yes 101670201
chr6 41697464 41697469 TFAP2A TRANSFAC yes 101670203
chr6 41697464 41697470 MZF1 JASPAR yes 101670204
chr6 41697468 41697477 SNAI2 JASPAR yes 101670205
chr6 41697468 41697478 FIGLA JASPAR yes 101670206
chr6 41697468 41697478 ID4 JASPAR yes 101670207
Genes associated with rs549186529[chr6:41697469], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More