EnhancerDB
  1. Home
  2. SNP
  3. rs549195913[chr16:87239899]
Enhancers that have rs549195913[chr16:87239899]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87224131 87248058 enh16895
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs549195913[chr16:87239899]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87239896 87239901 SP1 TRANSFAC yes 12201509
chr16 87239896 87239905 HIC2 JASPAR yes 12201510
chr16 87239899 87239903 LFA1 TRANSFAC yes 12201511
Genes associated with rs549195913[chr16:87239899], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More