EnhancerDB
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  3. rs549205638[chr19:13162283]
Enhancers that have rs549205638[chr19:13162283]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13160145 13191995 enh17930
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs549205638[chr19:13162283]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13161563 13165302 TCF7L2 GTRD no Colon (HCT116) 21850467
chr19 13161563 13165302 TCF7L2 GTRD no Colon (HCT116) 107690197
chr19 13161563 13165302 TCF7L2 GTRD no Colon (HCT116) 108388199
chr19 13161827 13165835 ZNF274 GTRD no Blood (GM12878) 107690198
chr19 13161827 13165835 ZNF274 GTRD no Blood (GM12878) 108388200
chr19 13161922 13165407 ZNF274 GTRD no Blood (GM12878) 107690199
chr19 13161922 13165407 ZNF274 GTRD no Blood (GM12878) 108388201
chr19 13161972 13165703 ZNF274 GTRD no Blood (GM12878) 107690200
chr19 13161972 13165703 ZNF274 GTRD no Blood (GM12878) 108388202
chr19 13162046 13165079 ZNF274 GTRD no Bone Marrow (K562) 107690201
chr19 13162046 13165079 ZNF274 GTRD no Bone Marrow (K562) 108388203
chr19 13162050 13165347 ZNF143 GTRD no Epithelial (MCF-7) 107690202
chr19 13162050 13165347 ZNF143 GTRD no Epithelial (MCF-7) 108388204
chr19 13162052 13165118 ZNF274 GTRD no Blood (GM12878) 107690203
chr19 13162052 13165118 ZNF274 GTRD no Blood (GM12878) 108388205
chr19 13162075 13165634 ZNF274 GTRD no Blood (GM12878) 107690204
chr19 13162075 13165634 ZNF274 GTRD no Blood (GM12878) 108388206
chr19 13162162 13164980 TCF7L2 GTRD no Colon (HCT116) 21850468
chr19 13162162 13164980 TCF7L2 GTRD no Colon (HCT116) 107690205
chr19 13162162 13164980 TCF7L2 GTRD no Colon (HCT116) 108388207
chr19 13162198 13165863 ZNF274 GTRD no Cervix (HeLa-S3) 107690206
chr19 13162198 13165863 ZNF274 GTRD no Cervix (HeLa-S3) 108388208
chr19 13162217 13164820 TCF7L2 GTRD no Colon (HCT116) 21850469
chr19 13162217 13164820 TCF7L2 GTRD no Colon (HCT116) 107690207
chr19 13162217 13164820 TCF7L2 GTRD no Colon (HCT116) 108388209
chr19 13162228 13165592 ZNF274 GTRD no Bone Marrow (K562) 107690208
chr19 13162228 13165592 ZNF274 GTRD no Bone Marrow (K562) 108388210
chr19 13162232 13165980 ZNF274 GTRD no Bone Marrow (K562) 107690209
chr19 13162232 13165980 ZNF274 GTRD no Bone Marrow (K562) 108388211
chr19 13162233 13165919 ZNF274 GTRD no Liver (HepG2) 21850470
chr19 13162233 13165919 ZNF274 GTRD no Liver (HepG2) 107690210
chr19 13162233 13165919 ZNF274 GTRD no Liver (HepG2) 108388212
chr19 13162237 13165359 ZNF274 GTRD no Bone Marrow (K562) 107690211
chr19 13162237 13165359 ZNF274 GTRD no Bone Marrow (K562) 108388213
chr19 13162241 13165852 ZBTB33 GTRD no Lung (A549) 107690212
chr19 13162241 13165852 ZBTB33 GTRD no Lung (A549) 108388214
chr19 13162250 13165374 ZNF274 GTRD no Bone Marrow (K562) 107690213
chr19 13162250 13165374 ZNF274 GTRD no Bone Marrow (K562) 108388215
chr19 13162262 13165776 ZNF143 GTRD no Epithelial (MCF-7) 107690214
chr19 13162262 13165776 ZNF143 GTRD no Epithelial (MCF-7) 108388216
chr19 13162272 13165141 ZNF274 GTRD no Liver (HepG2) 21850471
chr19 13162272 13165141 ZNF274 GTRD no Liver (HepG2) 107690215
chr19 13162272 13165141 ZNF274 GTRD no Liver (HepG2) 108388217
chr19 13162272 13165360 ZNF274 GTRD no Liver (HepG2) 21850472
chr19 13162272 13165360 ZNF274 GTRD no Liver (HepG2) 107690216
chr19 13162272 13165360 ZNF274 GTRD no Liver (HepG2) 108388218
chr19 13162272 13165617 ZNF274 GTRD no Liver (HepG2) 21850473
chr19 13162272 13165617 ZNF274 GTRD no Liver (HepG2) 107690217
chr19 13162272 13165617 ZNF274 GTRD no Liver (HepG2) 108388219
chr19 13162274 13165243 ZNF274 GTRD no Liver (HepG2) 21850474
chr19 13162274 13165243 ZNF274 GTRD no Liver (HepG2) 107690218
chr19 13162274 13165243 ZNF274 GTRD no Liver (HepG2) 108388220
chr19 13162279 13162300 ZNF263 JASPAR yes 112505190
chr19 13162281 13165343 ZNF274 GTRD no Bone Marrow (K562) 107690219
chr19 13162281 13165343 ZNF274 GTRD no Bone Marrow (K562) 108388221
chr19 13162282 13162303 ZNF263 JASPAR yes 112505191
chr19 13162283 13162298 HSF1 JASPAR yes 112505192
Genes associated with rs549205638[chr19:13162283], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More