EnhancerDB
  1. Home
  2. SNP
  3. rs549252942[chr19:6245661]
Enhancers that have rs549252942[chr19:6245661]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6230503 6255735 enh4983
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-MC) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs549252942[chr19:6245661]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6245657 6245671 TLX1 JASPAR yes 112263701
chr19 6245658 6245672 TLX1 JASPAR yes 112263702
Genes associated with rs549252942[chr19:6245661], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More