EnhancerDB
  1. Home
  2. SNP
  3. rs549327620[chr1:33613736]
Enhancers that have rs549327620[chr1:33613736]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33611625 33622108 enh11731
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Esophagus Bone (Osteoblast) Stomach Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs549327620[chr1:33613736]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33613736 33613752 RFX2 JASPAR yes 28031449
chr1 33613736 33613752 RFX3 JASPAR yes 28031450
chr1 33613736 33613752 RFX4 JASPAR yes 28031451
chr1 33613736 33613752 RFX5 JASPAR yes 28031452
Genes associated with rs549327620[chr1:33613736], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More