EnhancerDB
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  3. rs549341647[chr17:76940540]
Enhancers that have rs549341647[chr17:76940540]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76939164 76975154 enh17420
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs549341647[chr17:76940540]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76939960 76940666 TCF7L2 GTRD no Colon (HCT116) 21795457
chr17 76940173 76940945 TCF7L2 GTRD no Colon (HCT116) 21795458
chr17 76940197 76940794 TCF7L2 GTRD no Colon (HCT116) 21795459
chr17 76940207 76940892 TCF7L2 GTRD no Colon (HCT116) 21795460
chr17 76940208 76940879 TCF7L2 GTRD no Colon (HCT116) 21795461
chr17 76940359 76941470 ZNF274 GTRD no Cervix (HeLa-S3) 21795462
chr17 76940493 76941226 ZNF274 GTRD no Liver (HepG2) 21795463
chr17 76940539 76940559 ESR1 JASPAR yes 56191596
Genes associated with rs549341647[chr17:76940540], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More