EnhancerDB
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  3. rs549374742[chr16:88352617]
Enhancers that have rs549374742[chr16:88352617]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88327201 88357367 enh16902
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus
Transcript factors that have rs549374742[chr16:88352617]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88352037 88352633 ZBTB33 GTRD no Lung (A549) 21736017
chr16 88352103 88352691 ZNF274 GTRD no Cervix (HeLa-S3) 21736018
chr16 88352608 88352620 TFAP2A JASPAR yes 12278250
chr16 88352608 88352620 TFAP2B JASPAR yes 12278251
chr16 88352608 88352620 TFAP2C JASPAR yes 12278252
chr16 88352610 88352619 TFAP2A JASPAR yes 12278253
chr16 88352614 88352625 NFKB1 JASPAR yes 12278254
Genes associated with rs549374742[chr16:88352617], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More