EnhancerDB
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  3. rs549378952[chr7:105420746]
Enhancers that have rs549378952[chr7:105420746]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 105407025 105425424 enh24394
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Lung (PC-9) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs549378952[chr7:105420746]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 105420739 105420752 SMAD2 JASPAR yes 16974385
chr7 105420741 105420761 TP63 JASPAR yes 16974386
chr7 105420742 105420760 TP53 JASPAR yes 16974387
chr7 105420742 105420760 TP63 JASPAR yes 16974388
chr7 105420742 105420760 TP73 JASPAR yes 16974389
chr7 105420743 105420758 TP53 JASPAR yes 16974390
chr7 105420743 105420763 TP53 JASPAR yes 16974391
chr7 105420744 105420759 TP53 JASPAR yes 16974392
Genes associated with rs549378952[chr7:105420746], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More