EnhancerDB
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  3. rs549400277[chr17:49141259]
Enhancers that have rs549400277[chr17:49141259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49132219 49145135 enh4468
Skin (Keratinocyte) Prostate (PC-3) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Neural Stem Cells (H9)
Transcript factors that have rs549400277[chr17:49141259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49141245 49141259 ONECUT2 JASPAR yes 54745140
chr17 49141245 49141259 ONECUT3 JASPAR yes 54745141
chr17 49141245 49141260 FOXP1 JASPAR yes 54745142
chr17 49141245 49141260 HNF1A JASPAR yes 54745143
chr17 49141246 49141260 POU4F1 JASPAR yes 54745144
chr17 49141246 49141261 FOXA1 JASPAR yes 54745145
chr17 49141246 49141262 POU4F2 JASPAR yes 54745146
chr17 49141246 49141262 POU4F3 JASPAR yes 54745147
chr17 49141247 49141259 FOXC2 JASPAR yes 54745151
chr17 49141248 49141260 FOXI1 JASPAR yes 54745152
chr17 49141249 49141263 ONECUT3 JASPAR yes 54745153
chr17 49141249 49141264 HNF1A JASPAR yes 54745154
chr17 49141250 49141264 POU4F1 JASPAR yes 54745155
chr17 49141250 49141265 FOXA1 JASPAR yes 54745156
chr17 49141250 49141266 POU4F2 JASPAR yes 54745157
chr17 49141250 49141266 POU4F3 JASPAR yes 54745158
chr17 49141251 49141262 FOXB1 JASPAR yes 54745159
chr17 49141251 49141262 FOXC1 JASPAR yes 54745160
chr17 49141251 49141262 PROP1 JASPAR yes 54745161
chr17 49141251 49141263 FOXC2 JASPAR yes 54745162
chr17 49141252 49141264 FOXI1 JASPAR yes 54745163
chr17 49141253 49141268 HNF1A JASPAR yes 54745164
chr17 49141254 49141270 POU4F2 JASPAR yes 54745165
chr17 49141255 49141269 SPIC JASPAR yes 54745166
chr17 49141259 49141266 NKX3-1 JASPAR yes 54745167
Genes associated with rs549400277[chr17:49141259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More