EnhancerDB
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  3. rs549466084[chr19:14486016]
Enhancers that have rs549466084[chr19:14486016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 14470665 14486095 enh5020
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
chr19 14485924 14486626 vista28752
VISTA
Transcript factors that have rs549466084[chr19:14486016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 14485695 14486605 POLR2A UCSC Txn Factor no Conserved 108391429
chr19 14485749 14486129 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108391430
chr19 14485899 14487022 ZNF143 GTRD no Epithelial (MCF-7) 21853552
chr19 14485899 14487022 ZNF143 GTRD no Epithelial (MCF-7) 108391431
chr19 14485923 14487018 ZBTB33 GTRD no Lung (A549) 108391432
chr19 14485928 14487088 ZNF143 GTRD no Epithelial (MCF-7) 21853553
chr19 14485928 14487088 ZNF143 GTRD no Epithelial (MCF-7) 108391433
chr19 14485951 14486981 ZNF143 GTRD no Epithelial (MCF-7) 21853554
chr19 14485951 14486981 ZNF143 GTRD no Epithelial (MCF-7) 108391434
chr19 14485951 14486993 ZNF274 GTRD no Cervix (HeLa-S3) 21853555
chr19 14485951 14486993 ZNF274 GTRD no Cervix (HeLa-S3) 108391435
chr19 14485951 14487108 ZNF143 GTRD no Epithelial (MCF-7) 21853556
chr19 14485951 14487108 ZNF143 GTRD no Epithelial (MCF-7) 108391436
chr19 14485955 14487352 ZBTB33 GTRD no Lung (A549) 108391437
chr19 14485956 14486862 ZNF274 GTRD no Bone Marrow (K562) 21853557
chr19 14485956 14486862 ZNF274 GTRD no Bone Marrow (K562) 108391438
chr19 14485969 14486751 ZNF274 GTRD no Bone Marrow (K562) 21853558
chr19 14485969 14486751 ZNF274 GTRD no Bone Marrow (K562) 108391439
chr19 14485971 14486880 ZNF274 GTRD no Bone Marrow (K562) 21853559
chr19 14485971 14486880 ZNF274 GTRD no Bone Marrow (K562) 108391440
chr19 14485972 14486862 ZNF143 GTRD no Epithelial (MCF-7) 21853560
chr19 14485972 14486862 ZNF143 GTRD no Epithelial (MCF-7) 108391441
chr19 14485977 14486785 ZNF274 GTRD no Bone Marrow (K562) 21853561
chr19 14485977 14486785 ZNF274 GTRD no Bone Marrow (K562) 108391442
chr19 14485995 14486778 ZNF274 GTRD no Bone Marrow (K562) 21853562
chr19 14485995 14486778 ZNF274 GTRD no Bone Marrow (K562) 108391443
chr19 14485998 14486238 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108391444
Genes associated with rs549466084[chr19:14486016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More