EnhancerDB
  1. Home
  2. SNP
  3. rs549472341[chr17:79387733]
Enhancers that have rs549472341[chr17:79387733]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79375645 79405275 enh17444
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549472341[chr17:79387733]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79387723 79387735 NHLH1 JASPAR yes 56325360
chr17 79387724 79387733 SNAI2 JASPAR yes 56325361
chr17 79387724 79387734 ID4 JASPAR yes 56325362
chr17 79387724 79387734 NHLH1 JASPAR yes 56325363
chr17 79387724 79387734 TCF3 JASPAR yes 56325364
chr17 79387724 79387734 TCF4 JASPAR yes 56325365
chr17 79387726 79387735 ZEB1 JASPAR yes 56325366
chr17 79387730 79387736 ATF1 TRANSFAC yes 56325367
Genes associated with rs549472341[chr17:79387733], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More