EnhancerDB
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  3. rs549514179[chr17:47180348]
Enhancers that have rs549514179[chr17:47180348]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47176198 47191535 enh17201
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs549514179[chr17:47180348]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47180194 47180786 ZNF274 GTRD no Liver (HepG2) 21768261
chr17 47180205 47181025 ZNF143 GTRD no Epithelial (MCF-7) 21768262
chr17 47180210 47180782 ZNF274 GTRD no Liver (HepG2) 21768263
chr17 47180254 47180529 ZNF274 GTRD no Liver (HepG2) 21768264
chr17 47180320 47180815 ZNF274 GTRD no Liver (HepG2) 21768265
chr17 47180331 47180910 ZNF143 GTRD no Epithelial (MCF-7) 21768266
chr17 47180335 47180813 ZNF143 GTRD no Epithelial (MCF-7) 21768267
chr17 47180343 47180348 GATA1 TRANSFAC yes 54616188
chr17 47180343 47180349 GATA3 JASPAR yes 54616189
Genes associated with rs549514179[chr17:47180348], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More