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- rs549525224[chr1:172313273]
Enhancers that have rs549525224[chr1:172313273]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
172309865 |
172315243 |
enh27239 |
|
|
Transcript factors that have rs549525224[chr1:172313273]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
172312784
|
172313434
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21349826
|
|
|
chr1
|
172312784
|
172313434
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107845578
|
|
|
chr1
|
172312869
|
172313279
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
107845579
|
|
|
chr1
|
172313047
|
172313317
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107845583
|
|
|
chr1
|
172313263
|
172313277
|
ONECUT2
|
JASPAR
|
yes
|
|
33123959
|
|
|
chr1
|
172313269
|
172313288
|
REST
|
JASPAR
|
yes
|
|
33123960
|
|
Genes associated with rs549525224[chr1:172313273], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |