EnhancerDB
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  3. rs549536593[chr17:53531908]
Enhancers that have rs549536593[chr17:53531908]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs549536593[chr17:53531908]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53531897 53531908 HOXC12 JASPAR yes 54853258
chr17 53531907 53531912 TFAP2A TRANSFAC yes 54853260
chr17 53531907 53531913 MZF1 JASPAR yes 54853261
Genes associated with rs549536593[chr17:53531908], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More