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- rs549542022[chr19:2969616]
Enhancers that have rs549542022[chr19:2969616]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
2960165 |
2972415 |
enh17857 |
|
|
Transcript factors that have rs549542022[chr19:2969616]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
2968407
|
2969672
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21838361
|
|
|
chr19
|
2968818
|
2969658
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
21838362
|
|
|
chr19
|
2968871
|
2969658
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
21838364
|
|
|
chr19
|
2968912
|
2969667
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
21838365
|
|
|
chr19
|
2968955
|
2969696
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
21838368
|
|
|
chr19
|
2969613
|
2969630
|
RARA
|
JASPAR
|
yes
|
|
112105270
|
|
|
chr19
|
2969613
|
2969630
|
RXRA
|
JASPAR
|
yes
|
|
112105271
|
|
|
chr19
|
2969614
|
2969620
|
ZNF354C
|
JASPAR
|
yes
|
|
112105272
|
|
Genes associated with rs549542022[chr19:2969616], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |