EnhancerDB
  1. Home
  2. SNP
  3. rs549548860[chr3:128930864]
Enhancers that have rs549548860[chr3:128930864]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 128922053 128933133 enh63198
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Stomach Colon (HCT116) Pancreas Lung (PC-9) Breast Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs549548860[chr3:128930864]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 128930852 128930869 RARA JASPAR yes 5645936
chr3 128930852 128930869 RXRA JASPAR yes 5645937
chr3 128930854 128930874 ESR1 JASPAR yes 5645938
chr3 128930855 128930866 BATF JASPAR yes 5645939
chr3 128930857 128930868 FOS JASPAR yes 5645940
chr3 128930857 128930868 FOSL1 JASPAR yes 5645941
chr3 128930857 128930868 JUND JASPAR yes 5645942
chr3 128930858 128930869 FOSL2 JASPAR yes 5645943
chr3 128930858 128930869 JUNB JASPAR yes 5645944
chr3 128930858 128930872 JUN JASPAR yes 5645945
chr3 128930861 128930872 USF1 JASPAR yes 5645946
chr3 128930861 128930872 USF2 JASPAR yes 5645947
chr3 128930862 128930869 USF2 TRANSFAC yes 5645948
chr3 128930864 128930869 USF2 TRANSFAC yes 5645949
Genes associated with rs549548860[chr3:128930864], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More