EnhancerDB
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  3. rs549561479[chr1:180577481]
Enhancers that have rs549561479[chr1:180577481]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180576925 180587319 enh784
Bone Marrow (K562) Skin (Keratinocyte) Esophagus Astrocyte Liver Lung Placenta Adrenal Blood (Karpas-422) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs549561479[chr1:180577481]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180577467 180577481 POU4F1 JASPAR yes 33531290
chr1 180577467 180577483 POU4F3 JASPAR yes 33531291
chr1 180577475 180577487 POU2F1 JASPAR yes 33531292
chr1 180577475 180577488 POU3F3 JASPAR yes 33531293
chr1 180577475 180577489 POU1F1 JASPAR yes 33531294
chr1 180577476 180577488 POU3F1 JASPAR yes 33531295
chr1 180577476 180577488 POU3F2 JASPAR yes 33531296
chr1 180577476 180577489 POU2F2 JASPAR yes 33531297
chr1 180577477 180577485 FOXL1 JASPAR yes 33531298
chr1 180577477 180577486 POU3F4 JASPAR yes 33531299
chr1 180577477 180577486 POU5F1B JASPAR yes 33531300
chr1 180577477 180577488 FOXB1 JASPAR yes 33531301
chr1 180577477 180577488 FOXC1 JASPAR yes 33531302
Genes associated with rs549561479[chr1:180577481], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More