EnhancerDB
  1. Home
  2. SNP
  3. rs549579599[chr2:225386803]
Enhancers that have rs549579599[chr2:225386803]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 225380709 225396539 enh6176
Skin (Keratinocyte) Prostate (PC-3) Blood (T-cell) Lung (PC-9) Esophagus Astrocyte Liver Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Breast Thymus Epithelial (MCF-7)
Transcript factors that have rs549579599[chr2:225386803]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 225386782 225386803 IRF1 JASPAR yes 81337265
chr2 225386787 225386808 IRF1 JASPAR yes 81337271
chr2 225386788 225386803 FOXP1 JASPAR yes 81337272
chr2 225386788 225386809 IRF1 JASPAR yes 81337273
chr2 225386789 225386804 FOXP1 JASPAR yes 81337274
chr2 225386791 225386806 FOXP1 JASPAR yes 81337275
Genes associated with rs549579599[chr2:225386803], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More