EnhancerDB
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  3. rs549598986[chr17:53530657]
Enhancers that have rs549598986[chr17:53530657]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs549598986[chr17:53530657]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53530654 53530668 FOXF2 JASPAR yes 54853013
chr17 53530654 53530668 RORA JASPAR yes 54853014
chr17 53530657 53530669 FOXI1 JASPAR yes 54853015
Genes associated with rs549598986[chr17:53530657], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More