EnhancerDB
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  3. rs549664280[chr12:47755391]
Enhancers that have rs549664280[chr12:47755391]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47747943 47766515 enh2318
Prostate (PC-3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Uterus Thymus Epithelial (MCF-7)
chr12 47755231 47755452 vista13281
VISTA
Transcript factors that have rs549664280[chr12:47755391]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47751489 47756458 ZNF274 GTRD no Cervix (HeLa-S3) 108028766
chr12 47751489 47756458 ZNF274 GTRD no Cervix (HeLa-S3) 108028767
chr12 47751950 47756166 AR GTRD no Prostate (PC-3) 21543460
chr12 47751950 47756166 AR GTRD no Prostate (PC-3) 108028768
chr12 47751950 47756166 AR GTRD no Prostate (PC-3) 108028769
chr12 47752097 47755403 ZNF274 GTRD no Cervix (HeLa-S3) 108028770
chr12 47752097 47755403 ZNF274 GTRD no Cervix (HeLa-S3) 108028771
chr12 47752445 47756382 ZNF143 GTRD no Epithelial (MCF-7) 21543461
chr12 47752445 47756382 ZNF143 GTRD no Epithelial (MCF-7) 108028776
chr12 47752445 47756382 ZNF143 GTRD no Epithelial (MCF-7) 108028777
chr12 47752631 47755403 ZNF274 GTRD no Cervix (HeLa-S3) 108028778
chr12 47752631 47755403 ZNF274 GTRD no Cervix (HeLa-S3) 108028779
chr12 47753039 47755988 ZNF143 GTRD no Epithelial (MCF-7) 21543462
chr12 47753039 47755988 ZNF143 GTRD no Epithelial (MCF-7) 108028785
chr12 47753039 47755988 ZNF143 GTRD no Epithelial (MCF-7) 108028786
chr12 47753071 47756061 ZNF143 GTRD no Epithelial (MCF-7) 21543464
chr12 47753071 47756061 ZNF143 GTRD no Epithelial (MCF-7) 108028787
chr12 47753071 47756061 ZNF143 GTRD no Epithelial (MCF-7) 108028788
chr12 47753076 47755444 ZNF143 GTRD no Epithelial (MCF-7) 21543465
chr12 47753076 47755444 ZNF143 GTRD no Epithelial (MCF-7) 108028789
chr12 47753076 47755444 ZNF143 GTRD no Epithelial (MCF-7) 108028790
chr12 47753159 47756865 ZNF274 GTRD no Blood (GM12878) 108028794
chr12 47753159 47756865 ZNF274 GTRD no Blood (GM12878) 108028795
chr12 47753167 47755913 ZNF143 GTRD no Epithelial (MCF-7) 21543470
chr12 47753167 47755913 ZNF143 GTRD no Epithelial (MCF-7) 108028796
chr12 47753167 47755913 ZNF143 GTRD no Epithelial (MCF-7) 108028797
chr12 47753176 47756832 ZNF274 GTRD no Blood (GM12878) 108028798
chr12 47753176 47756832 ZNF274 GTRD no Blood (GM12878) 108028799
chr12 47753199 47756423 ZNF274 GTRD no Blood (GM12878) 108028800
chr12 47753199 47756423 ZNF274 GTRD no Blood (GM12878) 108028801
chr12 47753228 47755701 ZNF143 GTRD no Epithelial (MCF-7) 21543472
chr12 47753228 47755701 ZNF143 GTRD no Epithelial (MCF-7) 108028802
chr12 47753228 47755701 ZNF143 GTRD no Epithelial (MCF-7) 108028803
chr12 47753359 47755398 ZNF143 GTRD no Epithelial (MCF-7) 21543475
chr12 47753359 47755398 ZNF143 GTRD no Epithelial (MCF-7) 108028805
chr12 47753359 47755398 ZNF143 GTRD no Epithelial (MCF-7) 108028806
chr12 47753637 47756443 ZNF274 GTRD no Blood (GM12878) 108028807
chr12 47753637 47756443 ZNF274 GTRD no Blood (GM12878) 108028808
chr12 47753820 47755462 ZNF143 GTRD no Epithelial (MCF-7) 21543477
chr12 47753820 47755462 ZNF143 GTRD no Epithelial (MCF-7) 108028809
chr12 47753820 47755462 ZNF143 GTRD no Epithelial (MCF-7) 108028810
chr12 47754085 47755417 ZNF143 GTRD no Epithelial (MCF-7) 21543482
chr12 47754085 47755417 ZNF143 GTRD no Epithelial (MCF-7) 108028815
chr12 47754085 47755417 ZNF143 GTRD no Epithelial (MCF-7) 108028816
chr12 47754202 47756743 ZNF274 GTRD no Blood (GM12878) 108028820
chr12 47754202 47756743 ZNF274 GTRD no Blood (GM12878) 108028821
chr12 47754361 47756306 ZNF274 GTRD no Bone Marrow (K562) 108028822
chr12 47754361 47756306 ZNF274 GTRD no Bone Marrow (K562) 108028823
chr12 47754367 47756444 ZNF274 GTRD no Blood (GM12878) 108028824
chr12 47754367 47756444 ZNF274 GTRD no Blood (GM12878) 108028825
chr12 47754440 47756346 ZNF274 GTRD no Blood (GM12878) 108028830
chr12 47754440 47756346 ZNF274 GTRD no Blood (GM12878) 108028831
chr12 47754458 47756387 ZNF274 GTRD no Blood (GM12878) 108028832
chr12 47754458 47756387 ZNF274 GTRD no Blood (GM12878) 108028833
chr12 47754516 47756375 ZNF274 GTRD no Blood (GM12878) 108028841
chr12 47754516 47756375 ZNF274 GTRD no Blood (GM12878) 108028842
chr12 47754539 47756486 ZNF274 GTRD no Blood (GM12878) 108028848
chr12 47754539 47756486 ZNF274 GTRD no Blood (GM12878) 108028849
chr12 47754618 47755437 ZNF274 GTRD no Blood (GM12878) 108028860
chr12 47754618 47755437 ZNF274 GTRD no Blood (GM12878) 108028861
chr12 47754699 47756309 ZNF274 GTRD no Blood (GM12878) 108028875
chr12 47754699 47756309 ZNF274 GTRD no Blood (GM12878) 108028876
chr12 47754723 47756457 ZNF274 GTRD no Blood (GM12878) 108028877
chr12 47754723 47756457 ZNF274 GTRD no Blood (GM12878) 108028878
chr12 47754783 47755926 ZNF143 GTRD no Epithelial (MCF-7) 21543493
chr12 47754783 47755926 ZNF143 GTRD no Epithelial (MCF-7) 108028888
chr12 47754783 47755926 ZNF143 GTRD no Epithelial (MCF-7) 108028889
chr12 47754814 47756096 ZNF274 GTRD no Blood (GM12878) 108028890
chr12 47754814 47756096 ZNF274 GTRD no Blood (GM12878) 108028891
chr12 47754854 47755615 ZNF274 GTRD no Blood (GM12878) 108028894
chr12 47754854 47755615 ZNF274 GTRD no Blood (GM12878) 108028895
chr12 47754879 47755994 ZNF274 GTRD no Blood (GM12878) 108028897
chr12 47754959 47756058 ZNF274 GTRD no Bone Marrow (K562) 108028898
chr12 47755016 47755546 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108028900
chr12 47755050 47755566 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108028901
chr12 47755100 47755524 CTCF UCSC Txn Factor no Conserved 108028902
chr12 47755120 47755490 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108028903
chr12 47755159 47755439 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108028904
chr12 47755165 47755406 ZNF274 GTRD no Blood (GM12878) 108028905
chr12 47755178 47755394 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108028907
chr12 47755187 47755411 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108028908
chr12 47755208 47755950 ZNF274 GTRD no Bone Marrow (K562) 108028909
chr12 47755210 47755400 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108028910
chr12 47755218 47756156 ZNF274 GTRD no Blood (GM12878) 108028911
chr12 47755223 47755399 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108028912
chr12 47755233 47755463 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108028913
chr12 47755285 47756037 GATA3 GTRD no Thymus 21543495
chr12 47755285 47756037 GATA3 GTRD no Thymus 108028914
chr12 47755303 47756321 ZNF274 GTRD no Blood (GM12878) 108028915
chr12 47755335 47755943 ZNF274 GTRD no Blood (GM12878) 108028916
chr12 47755355 47756473 ZNF274 GTRD no Blood (GM12878) 108028917
chr12 47755360 47756065 ZNF274 GTRD no Blood (GM12878) 108028918
chr12 47755365 47755811 ZNF274 GTRD no Bone Marrow (K562) 108028919
Genes associated with rs549664280[chr12:47755391], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More