EnhancerDB
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  3. rs549694827[chr2:200841500]
Enhancers that have rs549694827[chr2:200841500]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 200836591 200856795 enh48394
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Stomach Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs549694827[chr2:200841500]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 200841485 200841500 LEF1 JASPAR yes 80073150
chr2 200841486 200841500 TCF7L2 JASPAR yes 80073151
Genes associated with rs549694827[chr2:200841500], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More