EnhancerDB
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  3. rs549707418[chr1:28669177]
Enhancers that have rs549707418[chr1:28669177]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28664885 28683047 enh11681
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Placenta Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Stomach
Transcript factors that have rs549707418[chr1:28669177]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28669171 28669181 SP1 JASPAR yes 27760404
chr1 28669173 28669178 SP1 TRANSFAC yes 27760405
chr1 28669175 28669188 NFKB1 JASPAR yes 27760406
chr1 28669175 28669188 NFKB2 JASPAR yes 27760407
Genes associated with rs549707418[chr1:28669177], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More