EnhancerDB
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  3. rs549708434[chr12:49277417]
Enhancers that have rs549708434[chr12:49277417]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 49273705 49285739 enh29564
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Lung (A549) Stomach Lung (PC-9) Pancreas Uterus Epithelial (MCF-7)
Transcript factors that have rs549708434[chr12:49277417]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 49274451 49280808 ZNF143 GTRD no Epithelial (MCF-7) 21544296
chr12 49274451 49280808 ZNF143 GTRD no Epithelial (MCF-7) 108029562
chr12 49274451 49280808 ZNF143 GTRD no Epithelial (MCF-7) 108029563
chr12 49275864 49278651 ZNF143 GTRD no Epithelial (MCF-7) 21544306
chr12 49275864 49278651 ZNF143 GTRD no Epithelial (MCF-7) 108029568
chr12 49275864 49278651 ZNF143 GTRD no Epithelial (MCF-7) 108029569
chr12 49275865 49277470 ZNF143 GTRD no Epithelial (MCF-7) 21544307
chr12 49275865 49277470 ZNF143 GTRD no Epithelial (MCF-7) 108029570
chr12 49275865 49277470 ZNF143 GTRD no Epithelial (MCF-7) 108029571
chr12 49275875 49277923 ZNF143 GTRD no Epithelial (MCF-7) 21544308
chr12 49275875 49277923 ZNF143 GTRD no Epithelial (MCF-7) 108029572
chr12 49275875 49277923 ZNF143 GTRD no Epithelial (MCF-7) 108029573
chr12 49275917 49279482 ZNF143 GTRD no Epithelial (MCF-7) 21544311
chr12 49275917 49279482 ZNF143 GTRD no Epithelial (MCF-7) 108029576
chr12 49275917 49279482 ZNF143 GTRD no Epithelial (MCF-7) 108029577
chr12 49275964 49277669 ZNF143 GTRD no Epithelial (MCF-7) 21544312
chr12 49275964 49277669 ZNF143 GTRD no Epithelial (MCF-7) 108029579
chr12 49275964 49277669 ZNF143 GTRD no Epithelial (MCF-7) 108029580
chr12 49276195 49277543 ZNF143 GTRD no Epithelial (MCF-7) 21544319
chr12 49276195 49277543 ZNF143 GTRD no Epithelial (MCF-7) 108029588
chr12 49276195 49277543 ZNF143 GTRD no Epithelial (MCF-7) 108029589
chr12 49276507 49278024 ZNF143 GTRD no Epithelial (MCF-7) 21544332
chr12 49276507 49278024 ZNF143 GTRD no Epithelial (MCF-7) 108029602
chr12 49277037 49277557 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108029603
chr12 49277133 49278012 ZNF143 GTRD no Epithelial (MCF-7) 21544335
chr12 49277133 49278012 ZNF143 GTRD no Epithelial (MCF-7) 108029604
chr12 49277171 49277918 ZNF143 GTRD no Epithelial (MCF-7) 21544336
chr12 49277171 49277918 ZNF143 GTRD no Epithelial (MCF-7) 108029605
chr12 49277232 49277966 ZNF143 GTRD no Epithelial (MCF-7) 21544337
chr12 49277232 49277966 ZNF143 GTRD no Epithelial (MCF-7) 108029606
chr12 49277313 49277967 TCF7L2 GTRD no Colon (HCT116) 108029607
chr12 49277313 49277983 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108029608
chr12 49277325 49277869 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108029609
chr12 49277338 49277914 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21544338
chr12 49277338 49277914 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108029610
chr12 49277367 49277823 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108029611
chr12 49277380 49277916 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21544339
chr12 49277380 49277916 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108029612
chr12 49277393 49277724 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21544340
chr12 49277393 49277724 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108029613
chr12 49277406 49278009 ZNF143 GTRD no Epithelial (MCF-7) 21544341
chr12 49277406 49278009 ZNF143 GTRD no Epithelial (MCF-7) 108029614
chr12 49277410 49277900 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108029615
chr12 49277415 49277436 REST JASPAR yes 120753088
chr12 49277416 49277435 REST JASPAR yes 120753089
Genes associated with rs549708434[chr12:49277417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More