EnhancerDB
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  3. rs549709113[chr1:206908530]
Enhancers that have rs549709113[chr1:206908530]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206905983 206916695 enh899
Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs549709113[chr1:206908530]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206906674 206908566 ZNF143 GTRD no Epithelial (MCF-7) 21372627
chr1 206907082 206914424 ZNF274 GTRD no Blood (GM12878) 107863444
chr1 206907105 206908717 ZNF143 GTRD no Epithelial (MCF-7) 21372631
chr1 206907393 206910848 ZNF143 GTRD no Epithelial (MCF-7) 21372641
chr1 206907393 206910848 ZNF143 GTRD no Epithelial (MCF-7) 107863445
chr1 206907679 206910751 AR GTRD no Prostate (PC-3) 107863446
chr1 206907774 206914449 ZNF274 GTRD no Blood (GM12878) 107863447
chr1 206908236 206910818 ZNF143 GTRD no Epithelial (MCF-7) 21372648
chr1 206908236 206910818 ZNF143 GTRD no Epithelial (MCF-7) 107863448
chr1 206908313 206910489 ZBTB33 GTRD no Lung (A549) 107863449
chr1 206908441 206910672 ZNF143 GTRD no Epithelial (MCF-7) 21372649
chr1 206908441 206910672 ZNF143 GTRD no Epithelial (MCF-7) 107863450
chr1 206908522 206908533 NFKB1 JASPAR yes 34823535
Genes associated with rs549709113[chr1:206908530], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More