EnhancerDB
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  3. rs549725079[chr16:88301584]
Enhancers that have rs549725079[chr16:88301584]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs549725079[chr16:88301584]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88301047 88302401 TCF7L2 GTRD no Colon (HCT116) 21735719
chr16 88301305 88302305 TCF7L2 GTRD no Colon (HCT116) 21735720
chr16 88301340 88302289 TCF7L2 GTRD no Colon (HCT116) 21735721
chr16 88301364 88302320 ZNF143 GTRD no Epithelial (MCF-7) 21735722
chr16 88301574 88301585 CEBPB JASPAR yes 12272255
chr16 88301582 88301592 TEAD1 JASPAR yes 12272256
chr16 88301582 88301594 TEAD1 JASPAR yes 12272257
Genes associated with rs549725079[chr16:88301584], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More