EnhancerDB
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  3. rs549744788[chr16:5001465]
Enhancers that have rs549744788[chr16:5001465]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4988771 5002255 enh16521
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Heart
Transcript factors that have rs549744788[chr16:5001465]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 5001452 5001473 IRF1 JASPAR yes 9294515
chr16 5001453 5001474 IRF1 JASPAR yes 9294516
chr16 5001457 5001472 FOXP1 JASPAR yes 9294517
chr16 5001458 5001473 FOXP1 JASPAR yes 9294518
chr16 5001459 5001474 FOXP1 JASPAR yes 9294519
chr16 5001460 5001475 FOXP1 JASPAR yes 9294520
chr16 5001461 5001476 FOXP1 JASPAR yes 9294521
Genes associated with rs549744788[chr16:5001465], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More