EnhancerDB
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  3. rs549789380[chr1:154461505]
Enhancers that have rs549789380[chr1:154461505]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154447249 154470672 enh12277
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Lung Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Stomach Pancreas (Panc1) Spleen Uterus Blood (T-cell) Heart
Transcript factors that have rs549789380[chr1:154461505]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154461499 154461507 SP1 TRANSFAC yes 32296123
chr1 154461500 154461505 SP1 TRANSFAC yes 32296124
chr1 154461501 154461506 SP1 TRANSFAC yes 32296125
Genes associated with rs549789380[chr1:154461505], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More