EnhancerDB
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  3. rs549789728[chr17:80256511]
Enhancers that have rs549789728[chr17:80256511]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs549789728[chr17:80256511]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80254490 80256686 P63 GTRD no Skin (Keratinocyte) 108311630
chr17 80254490 80256686 P63 GTRD no Skin (Keratinocyte) 108311631
chr17 80254696 80256801 P63 GTRD no Skin (Keratinocyte) 108311675
chr17 80254696 80256801 P63 GTRD no Skin (Keratinocyte) 108311676
chr17 80254831 80256751 POLR2A UCSC Txn Factor no Conserved 108311681
chr17 80254831 80256751 POLR2A UCSC Txn Factor no Conserved 108311682
chr17 80255652 80256729 TCF7L2 GTRD no Colon (HCT116) 21799293
chr17 80255652 80256729 TCF7L2 GTRD no Colon (HCT116) 108311787
chr17 80255652 80256729 TCF7L2 GTRD no Colon (HCT116) 108311788
chr17 80255675 80256515 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21799294
chr17 80255675 80256515 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108311789
chr17 80255675 80256515 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108311790
chr17 80255890 80256540 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21799321
chr17 80255890 80256540 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108311838
chr17 80255943 80256519 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21799330
chr17 80255943 80256519 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108311850
chr17 80255979 80256563 P63 GTRD no Skin (Keratinocyte) 108311861
chr17 80256126 80256590 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21799377
chr17 80256126 80256590 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108311911
chr17 80256239 80256615 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21799380
chr17 80256239 80256615 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108311915
chr17 80256283 80257456 TCF7L2 GTRD no Colon (HCT116) 21799381
chr17 80256283 80257456 TCF7L2 GTRD no Colon (HCT116) 108311916
chr17 80256288 80258242 ZNF274 GTRD no Bone Marrow (K562) 21799382
chr17 80256288 80258242 ZNF274 GTRD no Bone Marrow (K562) 108311917
chr17 80256349 80260494 ZNF274 GTRD no Cervix (HeLa-S3) 21799383
chr17 80256349 80260494 ZNF274 GTRD no Cervix (HeLa-S3) 108311918
chr17 80256361 80257522 ZNF274 GTRD no Bone Marrow (K562) 21799384
chr17 80256361 80257522 ZNF274 GTRD no Bone Marrow (K562) 108311919
chr17 80256422 80258239 ZBTB33 GTRD no Lung (A549) 108311920
chr17 80256497 80256512 RFX5 JASPAR yes 56359891
Genes associated with rs549789728[chr17:80256511], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More