EnhancerDB
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  3. rs549820554[chr1:15755550]
Enhancers that have rs549820554[chr1:15755550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 15740198 15759915 enh26553
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs549820554[chr1:15755550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 15755545 15755555 SP1 JASPAR yes 26985646
chr1 15755546 15755554 SP1 TRANSFAC yes 26985647
Genes associated with rs549820554[chr1:15755550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More