EnhancerDB
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  3. rs549829428[chr11:18403271]
Enhancers that have rs549829428[chr11:18403271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 18398985 18408115 enh13826
Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Muscle (A673) Heart
Transcript factors that have rs549829428[chr11:18403271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 18403265 18403286 IRF1 JASPAR yes 37737301
chr11 18403266 18403287 IRF1 JASPAR yes 37737302
chr11 18403267 18403288 IRF1 JASPAR yes 37737303
chr11 18403268 18403283 FOXP1 JASPAR yes 37737304
chr11 18403268 18403289 IRF1 JASPAR yes 37737305
chr11 18403269 18403290 IRF1 JASPAR yes 37737306
chr11 18403270 18403285 FOXP1 JASPAR yes 37737307
chr11 18403270 18403291 IRF1 JASPAR yes 37737308
chr11 18403271 18403286 FOXP1 JASPAR yes 37737309
chr11 18403271 18403292 IRF1 JASPAR yes 37737310
Genes associated with rs549829428[chr11:18403271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More