EnhancerDB
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  3. rs549852329[chr5:180258628]
Enhancers that have rs549852329[chr5:180258628]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 180248485 180261855 enh8910
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Stomach Thyroid Breast Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs549852329[chr5:180258628]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 180258622 180258632 SP1 JASPAR yes 68225450
chr5 180258624 180258629 SP1 TRANSFAC yes 68225451
chr5 180258625 180258630 SP1 TRANSFAC yes 68225452
chr5 180258625 180258631 SP1 TRANSFAC yes 68225453
chr5 180258628 180258633 SP1 TRANSFAC yes 68225454
Genes associated with rs549852329[chr5:180258628], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More