EnhancerDB
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  3. rs549864940[chr11:12208362]
Enhancers that have rs549864940[chr11:12208362]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12175905 12217435 enh13777
Bone Marrow (K562) Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs549864940[chr11:12208362]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12208355 12208368 NFKB1 JASPAR yes 37430385
chr11 12208355 12208368 NFKB2 JASPAR yes 37430386
chr11 12208356 12208366 NFKB1 JASPAR yes 37430387
chr11 12208356 12208367 NFKB1 JASPAR yes 37430388
chr11 12208360 12208364 H4TF2 TRANSFAC yes 37430389
Genes associated with rs549864940[chr11:12208362], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More