EnhancerDB
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  3. rs549877670[chr5:171612736]
Enhancers that have rs549877670[chr5:171612736]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs549877670[chr5:171612736]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171612720 171612736 SOX4 JASPAR yes 67772959
chr5 171612721 171612736 SOX21 JASPAR yes 67772960
Genes associated with rs549877670[chr5:171612736], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More