EnhancerDB
  1. Home
  2. SNP
  3. rs549896082[chr6:13359424]
Enhancers that have rs549896082[chr6:13359424]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13358871 13387475 enh8960
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Blood (T-cell) Heart
Transcript factors that have rs549896082[chr6:13359424]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13359415 13359428 TFAP2A JASPAR yes 100020382
chr6 13359415 13359428 TFAP2B JASPAR yes 100020383
chr6 13359415 13359428 TFAP2C JASPAR yes 100020384
chr6 13359420 13359425 SP1 TRANSFAC yes 100020385
chr6 13359420 13359426 SP1 TRANSFAC yes 100020386
chr6 13359422 13359443 ZNF263 JASPAR yes 100020387
Genes associated with rs549896082[chr6:13359424], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More