EnhancerDB
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  3. rs549921558[chr12:123558559]
Enhancers that have rs549921558[chr12:123558559]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123537905 123558786 enh15079
Brain (SK-N-MC) Liver Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs549921558[chr12:123558559]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123558270 123558612 TCF7L2 GTRD no Colon (HCT116) 21580189
chr12 123558270 123558612 TCF7L2 GTRD no Colon (HCT116) 108066867
chr12 123558270 123558612 TCF7L2 GTRD no Colon (HCT116) 108066868
chr12 123558397 123558823 ZNF274 GTRD no Bone Marrow (K562) 108066869
chr12 123558397 123558823 ZNF274 GTRD no Bone Marrow (K562) 108066870
chr12 123558464 123558895 ZNF274 GTRD no Bone Marrow (K562) 108066871
chr12 123558554 123558860 ZNF274 GTRD no Blood (GM12878) 108066872
Genes associated with rs549921558[chr12:123558559], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More