EnhancerDB
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  3. rs549955305[chr1:212398549]
Enhancers that have rs549955305[chr1:212398549]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212396705 212423635 enh12640
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs549955305[chr1:212398549]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212398541 212398550 HIC2 JASPAR yes 35111676
chr1 212398545 212398557 NHLH1 JASPAR yes 35111677
chr1 212398545 212398558 ZBTB18 JASPAR yes 35111678
chr1 212398546 212398556 NHLH1 JASPAR yes 35111679
chr1 212398546 212398560 ZIC1 JASPAR yes 35111680
Genes associated with rs549955305[chr1:212398549], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More