EnhancerDB
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  3. rs549965232[chr12:65185141]
Enhancers that have rs549965232[chr12:65185141]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65181625 65209755 enh14785
Prostate (PC-3) Brain (SK-N-MC) Large Intestine Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs549965232[chr12:65185141]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65185132 65185149 ZNF410 JASPAR yes 121429623
chr12 65185134 65185144 HOXA13 JASPAR yes 121429624
chr12 65185134 65185144 HOXB13 JASPAR yes 121429625
chr12 65185134 65185144 HOXD13 JASPAR yes 121429626
chr12 65185134 65185145 HOXA10 JASPAR yes 121429627
chr12 65185135 65185144 CDX1 JASPAR yes 121429628
chr12 65185135 65185146 CDX2 JASPAR yes 121429629
Genes associated with rs549965232[chr12:65185141], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More