EnhancerDB
  1. Home
  2. SNP
  3. rs549969709[chr16:379535]
Enhancers that have rs549969709[chr16:379535]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs549969709[chr16:379535]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 375960 380365 ZNF143 GTRD no Epithelial (MCF-7) 21683846
chr16 375960 380365 ZNF143 GTRD no Epithelial (MCF-7) 108170225
chr16 377933 380354 ZNF143 GTRD no Epithelial (MCF-7) 21683885
chr16 377933 380354 ZNF143 GTRD no Epithelial (MCF-7) 108170281
chr16 379527 379535 SP1 TRANSFAC yes 9105368
chr16 379527 379537 SP1 JASPAR yes 9105369
chr16 379530 379543 TFAP2A JASPAR yes 9105370
chr16 379530 379543 TFAP2B JASPAR yes 9105371
chr16 379530 379543 TFAP2C JASPAR yes 9105372
Genes associated with rs549969709[chr16:379535], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More