EnhancerDB
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  3. rs549980771[chr1:235456979]
Enhancers that have rs549980771[chr1:235456979]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235448657 235464435 enh12801
Prostate (PC-3) Liver (HepG2) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Lung (PC-9) Pancreas Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs549980771[chr1:235456979]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235456963 235456984 IRF1 JASPAR yes 36361625
chr1 235456965 235456980 FOXP1 JASPAR yes 36361626
chr1 235456966 235456981 FOXP1 JASPAR yes 36361627
chr1 235456973 235456991 MAFF JASPAR yes 36361628
chr1 235456975 235456988 JUN JASPAR yes 36361629
chr1 235456975 235456990 MAFK JASPAR yes 36361630
chr1 235456976 235456989 ATF4 JASPAR yes 36361631
chr1 235456976 235456997 ZNF263 JASPAR yes 36361632
chr1 235456977 235456991 TCF7L2 JASPAR yes 36361633
chr1 235456977 235456992 LEF1 JASPAR yes 36361634
chr1 235456978 235456989 CEBPB JASPAR yes 36361635
Genes associated with rs549980771[chr1:235456979], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More